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Table 2 Genetic predictors of 5-oxoproline and their association with Intelligence

From: Causal relationships between genetically determined metabolites and human intelligence: a Mendelian randomization study

SNP

Gene

CHR

A1

A2

5-oxoproline

Intelligence

Beta

SE

P value

Beta

SE

P value

rs11986602

EXOSC4

8

A

T

− 0.0620

0.0029

1.07E−104

− 0.0196

0.0044

9.53E−06

rs9987070

–

7

C

G

− 0.0280

0.0059

2.43E−06

− 0.0083

0.0071

0.2381

rs10890517

–

2

T

C

− 0.0197

0.0043

3.45E−06

− 0.0139

0.0069

0.0427

rs5764925

–

22

A

G

− 0.0160

0.0031

1.91E−07

− 0.0021

0.0050

0.6782

rs13159409

–

5

T

G

− 0.0148

0.0032

2.74E−06

− 0.0075

0.0053

0.1535

rs12294182

MICAL2

11

T

C

0.0140

0.0029

1.07E−06

0.0019

0.0041

0.6478

rs2068157

AACSP1

5

T

C

0.0137

0.0031

8.99E−06

− 0.0037

0.0048

0.4362

rs9964014

DLGAP1

18

T

C

− 0.0132

0.0025

1.80E−07

− 0.0060

0.0078

0.4388

rs11605366

–

11

T

C

− 0.0122

0.0027

7.55E−06

− 0.0111

0.0043

0.0094

rs12143589

–

1

A

G

0.0118

0.0023

3.38E−07

− 0.0024

0.0036

0.5034

rs13013224

LOC105369165

2

C

G

0.0113

0.0023

7.04E−07

− 0.0031

0.0035

0.3781

rs306676

–

13

A

G

0.0112

0.0024

2.48E−06

− 0.0027

0.0041

0.5047

rs9650466

MROH1

8

T

C

0.0110

0.0020

3.80E−08

0.0046

0.0028

0.0938

rs1001210

ATXN1

6

T

C

− 0.0106

0.0023

3.80E−−06

− 0.0051

0.0037

0.1678

rs17017431

TRAF5

1

A

T

0.0105

0.0023

3.80E−06

0.0022

0.0038

0.5628

rs10853533

SLC14A2

18

A

C

0.0103

0.0023

6.09E−06

− 0.0068

0.0043

0.1133

rs2115151

SPATA5

4

A

T

0.0103

0.0022

3.75E−06

0.0024

0.0041

0.5561

rs7015048

–

8

T

C

0.0100

0.0015

3.16E−11

− 0.0015

0.0028

0.5864

rs9460424

–

6

T

G

− 0.0097

0.0022

9.16E−06

− 0.0053

0.0035

0.1328

rs4646693

LRRK1

15

T

C

− 0.0090

0.0020

6.80E−06

− 0.0001

0.0054

0.9909

rs8092658

SLC14A2

18

A

C

− 0.0090

0.0020

6.80E−06

0.0001

0.0028

0.9828

rs1578743

–

10

A

C

0.0075

0.0016

1.70E−06

0.0026

0.0029

0.3664

rs7973508

–

12

A

G

− 0.0073

0.0016

5.40E−06

0.0007

0.0030

0.8245

rs12464424

–

2

T

C

− 0.0071

0.0016

7.47E−06

0.0055

0.0030

0.0651

rs12611788

GALNT14

2

T

C

− 0.0070

0.0015

5.51E−06

− 0.0062

0.0029

0.0301